I haven't tried the level 60 crafts, but I did notice the penalty for crafting above your level was very very steep. It should be fairly simple for me to HQ koppranickel nuggets, but it's rare that I get above 30%. It wouldn't surprise me if the change somehow also applied to your level 60 crafts.

Also, I wasn't aware that Ingenuity 2 buffed quality as well? I had never noticed a change to how much quality I get while buffed under that, and it was part of my HW rotation, but I also sometimes don't pay too much attention to the numbers floating around on my screen.