Or Final Fantasy: The Spirits Within, where the plot was caused by a meteor containing some of another planet's lifestream crashing into Earth and the souls within it antagonizing humanity as phantoms.
Or Final Fantasy: Crystal Chronicles, where the instigator of the game's conflict (though not its main antagonist) was literally named "Meteor Parasite," crashed on the planet, and began spreading toxic miasma that the game's main antagonist (Raem) took advantage of to sate his appetite for painful memories.
... come to think of it, meteors with unwelcome guests crashing into planets is relatively common in fiction.
Sarcasm aside, a lot of the Amaurot dungeon takes cues from the Book of Revelation, from the "names" of the locations, to fire raining from the sky and the rivers turning to blood, to the bosses being identified as "Beasts." Notably the final boss is named "Therion," which is one of the many names attributed to the Beast of Revelation.