So this was a pretty big topic back at the beginning of 2.0. Basically, regardless of what you've chosen now it'll default to what you originally chose back in 1.0. If you had Pugalist back in 1.0 then you'll be Pugalist and in Ul'duh, even if you chose Gridania and Archer. I was pretty upset (and still am) that my character was originally from Ul'duh (even on my character certificate) but is now from Limsa cause it started me as a Murader. I don't believe they'll be changing it.