Controller Hiccups on Computer

I've been experience some pretty bad controller hiccups in game recently. Both with PS3 and PS4 controllers (prefer PS3 since that is what I'm use to the most)

Every now and again my controller will have a disconnect of a second or a few, which causes whatever my last imputs to be held indefinitely. An example would be is if I'm in a fight, and I need to move just slightly to avoid an mechanic, my controller will hiccup and the direction I am running in will continue for a second or a few. This has been very frustrating and lead to some near fatal situations.

This isn't a hardware issue, as I have tried different controllers that aren't old, and two different cords as well. I am using DS3 for PS3 controllers and DS4 for PS4 controllers

Anyone know whats up with this?