Except it isn't a fault in writing, and its inclusion does not contradict anything. If anything, it explains a lot in hindsight. What Omega was trying to figure out and replicate in the raids, what saved Nero at the end of CT (remember, his corruption vanished after he swore he would not die there and would live on), how we were able to survive a hit from A12's Holy Judgement (our first canonical use of tank LB3), etc etc.
