First off let me say this really isn't a big thing, but the OCD side of me freaks out every time I look at my master list of spells...For some reason unknown to any but Altana and Promathia there are some spells that do not follow next in tier below their 'weaker' counterpart. (Look at Reraise1 and Reraise2 for example, I don't know why it does this but it does when you autosort)
WHITE MAGIC
Cure I > II > III > IV > V > VI
Curaga I > II > III > IV
Cura I > II
Raise I > II > III
Regen I > II > III > IV
Refresh I > II
Stat ailment removals (all of them; Single target first then AoE)
Erase > Esuna > Sacrifice
Protect I > II > III > IV > V
Shell I > II > III > IV > V
Protectra I > II > III > IV > V
Shellra I > II > III > IV > V
Blink > Stoneskin > Aquaveil > Haste > Auspice > Animus Augeo > Animus Minuo > Adloquium > Reprisal
Gain- spells
Boost- spell
Barspells (single target then AoE)
En- spells
-storm spells
Reraise I > II > III
Slow > Slow II > Paralyze > Paralyze II > Silence > Repose
Dia I > II > III
Diaga
Banish I > II > III
Banishga I > II
Holy
Teleport- spells
Recall- spells
Invisible > Sneak > Deodorize
BLACK MAGIC
Single target magic spells (like they are listed now)
Firaga I, II, III
Firaja
Blizzaga I, II, III
Blizzaja
Aeroga I, II, III
Aeroja
Stonega I, II, III
Stoneja
Thundaga I, II, III
Thundaja
Ancient Magic spells (as they are in same order and list now)
-helix spells (same order of element as now)
Burn > Frost > Choke > Rasp > Shock > Drown
Drain I, II
Aspir I, II
Absorb- spells
Poison I, II
Poisonga
Bio I, II, III
Stun > Break > Blind > Blind II > Bind > Gravity
Sleep I, II
Sleepga I, II
Dispel
Endark
-spike spells
Klimaform
Tractor
Escape
Warp I, II
Retrace
Ok I know its a long list, and I think I have included all the current magic for White and Black (sorry I don't know of any great orders for blue magic and I think summoning magic and Ninjutsu are pretty cleanly organized already; to my knowledge)
I leave this in closing, asking that, am I the only one here that gets a strange quirk every time I see the odd auto-arrangement of spells? If you feel the same, like this post and comment below. Like I said I know its not a priority fix, but I think it would be quite simple and quick to fix in the same token.